PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han001316
Common NameDREB2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family ERF
Protein Properties Length: 314aa    MW: 34487.2 Da    PI: 4.8029
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S22669071PU_refUnigeneView CDS
PUT-169a-Helianthus_annuus-24893PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.9e-1990139255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++GVr++  +g+WvAeIr+p   + r +r +lg+fg+a eAa a+++a+++++g
  Han001316  90 NFRGVRQRT-WGKWVAEIREP---N-RgRRLWLGTFGSAVEAALAYDEAARAMYG 139
                58****999.**********8...3.35************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.94E-3189148No hitNo description
PROSITE profilePS5103220.65390147IPR001471AP2/ERF domain
SMARTSM003801.5E-3590153IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.7E-2990148IPR001471AP2/ERF domain
PfamPF008472.0E-1390139IPR001471AP2/ERF domain
PRINTSPR003671.9E-891102IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-1991147IPR016177DNA-binding domain
PRINTSPR003671.9E-8113129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MALGFSDRNT EMSPYSQQSN TSAVPMDSSK KRKTRSRKEA PEKVAATLAK WIEYNKANED  60
GKAKTRKAPA KGSKKGCMKG KGGPENSRTN FRGVRQRTWG KWVAEIREPN RGRRLWLGTF  120
GSAVEAALAY DEAARAMYGT SARLNLPNCR SKNDILPLLV TNPASSCDST TTCSYSEVDA  180
THDSKPGPAV FPSVKHEESV QVKHEPEIVA KEEHCVDNND LGFDIGDEMF DLEELLGAVE  240
DSNPEAGSGD GYDGRFVNGA DANENMQMYM QPDPCVSGQD YSFDFLQPGR PEDCSFTLEE  300
LGLGLDAELD LYSN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-1690147260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13138RKTRSRKE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLQ5J4U20.0Q5J4U2_HELAN; DREB2 transcription factor
STRINGPGSC0003DMT4000615412e-66(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.25e-29DRE-binding protein 2A
Publications ? help Back to Top
  1. D
    Functional interaction between two transcription factors involved in the developmental regulation of a small heat stress protein gene promoter.
    Plant Physiol., 2005. 139(3): p. 1483-94
    [PMID:16244139]